acidic

Examples of acidic in the following topics:

• Connecting Proteins to Glucose Metabolism

  • However, if there are excess amino acids, or if the body is in a state of starvation, some amino acids will be shunted into the pathways of glucose catabolism.
  • The remaining atoms of the amino acid result in a keto acid: a carbon chain with one ketone and one carboxylic acid group.
  • The keto acid can then enter the citric acid cycle.
  • When deaminated, amino acids can enter the pathways of glucose metabolism as pyruvate, acetyl CoA, or several components of the citric acid cycle.
  • The carbon skeletons of certain amino acids (indicated in boxes) are derived from proteins and can feed into pyruvate, acetyl CoA, and the citric acid cycle.

• Amino Acids

  • An amino acid contains an amino group, a carboxyl group, and an R group, and it combines with other amino acids to form polypeptide chains.
  • Amino acids are the monomers that make up proteins.
  • The name "amino acid" is derived from the amino group and carboxyl-acid-group in their basic structure.
  • Each amino acid is attached to another amino acid by a covalent bond, known as a peptide bond.
  • The carboxyl group of one amino acid is linked to the amino group of the incoming amino acid.

• Lipid Molecules

  • Stearic acid and palmitic acid, which are commonly found in meat, are examples of saturated fats.
  • Oleic acid is an example of an unsaturated fatty acid.
  • Essential fatty acids are fatty acids required for biological processes, but not synthesized by the human body.
  • Omega-3 fatty acid, or alpha-linoleic acid (ALA) , falls into this category and is one of only two fatty acids known to be essential for humans (the other being omega-6 fatty acid, or linoleic acid).
  • Alpha-linolenic acid is an example of an omega-3 fatty acid.

• Acetyl CoA to CO2

  • The acetyl carbons of acetyl CoA are released as carbon dioxide in the citric acid cycle.
  • Acetyl CoA links glycolysis and pyruvate oxidation with the citric acid cycle.
  • In addition to the citric acid cycle, named for the first intermediate formed, citric acid, or citrate, when acetate joins to the oxaloacetate, the cycle is also known by two other names.
  • The TCA cycle is named for tricarboxylic acids (TCA) because citric acid (or citrate) and isocitrate, the first two intermediates that are formed, are tricarboxylic acids.
  • Describe the fate of the acetyl CoA carbons in the citric acid cycle

• Lipid-Derived, Amino Acid-Derived, and Peptide Hormones

  • All hormones in the human body can be divided into lipid-derived, amino acid-derived, and peptide hormones.
  • The amino acid-derived hormones are relatively small molecules derived from the amino acids tyrosine and tryptophan .
  • If a hormone is amino acid-derived, its chemical name will end in "-ine".
  • The structure of peptide hormones is that of a polypeptide chain (chain of amino acids).
  • Amino acid-derived and polypeptide hormones are water-soluble and insoluble in lipids.

• Nitrogenous Waste in Birds and Reptiles: Uric Acid

  • In contrast, mammals (including humans) produce urea from ammonia; however, they also form some uric acid during the breakdown of nucleic acids.
  • Uric acid is a compound similar to purines found in nucleic acids.
  • Uric acid is also less toxic than ammonia or urea.
  • Uric acid is released in hypoxic conditions.
  • These include (a) ammonia, (b) urea, and (c) uric acid.

• Peptide Bonding between Amino Acids

  • The peptide bond is an amide bond which links amino acids together to form proteins.
  • A peptides is a molecule composed of two or more amino acids.
  • The bond that holds together the two amino acids is a peptide bond, or a covalent chemical bond between two compounds (in this case, two amino acids).
  • The peptide bond (circled) links two amino acids together.
  • Identify the amino acids that were combined to create a peptide.

• pH, Buffers, Acids, and Bases

  • The pH of a solution indicates its acidity or basicity (alkalinity).
  • Non-neutral pH readings result from dissolving acids or bases in water.
  • The stronger the acid, the more readily it donates H+.
  • For example, hydrochloric acid (HCl) is highly acidic and completely dissociates into hydrogen and chloride ions, whereas the acids in tomato juice or vinegar do not completely dissociate and are considered weak acids; conversely, strong bases readily donate OH– and/or react with hydrogen ions.
  • Antacids, which combat excess stomach acid, are another example of buffers.

• Transcription in Prokaryotes

  • The set of three nucleotides that codes for a single amino acid is known as a codon.
  • There are 64 codons in total, 61 that encode amino acids and 3 that code for chain termination.
  • For example, although codons GAA and GAG both specify glutamic acid (redundancy), neither of them specifies any other amino acid (no ambiguity).
  • The codons encoding one amino acid may differ in any of their three positions.
  • For example, the amino acid glutamic acid is specified by GAA and GAG codons (difference in the third position); the amino acid leucine is specified by UUA, UUG, CUU, CUC, CUA, CUG codons (difference in the first or third position); while the amino acid serine is specified by UCA, UCG, UCC, UCU, AGU, AGC (difference in the first, second or third position).

• Citric Acid Cycle

  • Like the conversion of pyruvate to acetyl CoA, the citric acid cycle takes place in the matrix of the mitochondria.
  • If this transfer does not occur, the oxidation steps of the citric acid cycle also do not occur.
  • Note that the citric acid cycle produces very little ATP directly and does not directly consume oxygen.
  • The last step in the citric acid cycle regenerates oxaloacetate by oxidizing malate.
  • Several of the intermediate compounds in the citric acid cycle can be used in synthesizing non-essential amino acids; therefore, the cycle is amphibolic (both catabolic and anabolic).